[tt] Next Big Future - 3 new articles

Eugen Leitl <eugen at leitl.org> on Tue Jul 1 06:49:12 UTC 2008

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Subject: Next Big Future - 3 new articles
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"[2]Next Big Future" - 3 new articles

    1. [3]Molecular Genetics of Aging conference september 24-28, 2008
    2. [4]Electrostatic-based DNA Microarray Technique Could
       Revolutionize Medical Diagnostics
    3. [5]LIFT cancer clinical trials
    4. [6]More Recent Articles
    5. [7]Search Next Big Future

[8]Molecular Genetics of Aging conference september 24-28, 2008

   The fourth meeting on the Molecular Genetics of Aging is being
   organized by Steven Austad, University of Texas Health Science Center;
   Judith Campisi, Lawrence Berkeley National Laboratory, Buck Institute
   for Age Research and David Sinclair, Harvard Medical School
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   Judith Campisi is working on one of the major [15]SENS life extension
   projects to deal with too many old cells. ([16]Apoptosens)
   Topics and Co-Chairs:
   Genetics I
   Heidi Tissenbaum (U Mass Worcester MA USA)
   Scott Pletcher (Baylor Houston TX USA)
   Genomic Stability
   Jan Vijg (Buck Institute Novato CA USA)
   Elizabeth Blackburn (UC San Francisco CA USA)
   Mitochondria / Metabolism
   Peter Rabinovitch (U Washington Seattle WA USA)
   Leonard Guarente (MIT Boston USA)
   Cellular Senescence / Apoptosis / Stress
   John Sedivy (Brown U Providence RI USA
   Norman Sharpless (UNC Chapel Hill NC USA)
   Stem Cells
   Irina Conboy (UC Berkeley CA USA)
   Karl Rudolph (Med Sch Hanover Germany)
   Proliferative Homeostasis
   Paul Hasty (UT Health Science Center, San Antonio, TX USA)
   Rolf Bodmer (Burnham Institute San Diego CA USA)
   Environment / Interventions
   Richard Miller (U. Mich., Ann Arbor MI USA)
   Steven Spindler (UC Riverside CA USA)
   Genetics II
   Anne Brunet (Stanford U CA USA)
   Jan Hoeijmakers (Erasmus U Rotterdam Netherlands)

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   2008'

[34]Electrostatic-based DNA Microarray Technique Could Revolutionize Medical
Diagnostics

   [35]A team of researchers with the U.S. Department of Energy's
   Lawrence Berkeley National Laboratory (Berkeley Lab) has invented a
   technique in which DNA or RNA assays -- the key to genetic profiling
   and disease detection -- can be read and evaluated without the need of
   elaborate chemical labeling or sophisticated instrumentation.
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   Based on electrostatic repulsion -- in which objects with the same
   electrical charge repel one another -- the technique is relatively
   simple and inexpensive to implement, and can be carried out in a
   matter of minutes.
   "One of the most amazing things about our electrostatic detection
   method is that it requires nothing more than the naked eye to read out
   results that currently require chemical labeling and confocal laser
   scanners," said Jay Groves, a chemist with joint appointments at
   Berkeley Lab's Physical Biosciences Division and the Chemistry
   Department of the University of California (UC) at Berkeley, who led
   this research. "We believe this technique could revolutionize the use
   of DNA microarrays for both research and diagnostics."
   Groves, who is also a Howard Hughes Medical Institute (HHMI)
   investigator, and members of his research group Nathan Clack and
   Khalid Salaita, have published a paper on their technique in the
   journal Nature Biotechnology, which is now available online. The paper
   is entitled "Electrostatic readout of DNA microarrays with charged
   microspheres."
   In their paper, Groves, Clack, and Salaita describe how dispersing a
   fluid containing thousands of electrically-charged microscopic beads
   or spheres made of silica (glass) across the surface of a DNA
   microarray and then observing the Brownian motion of the spheres
   provides measurements of the electrical charges of the DNA molecules.
   These measurements can in turn be used to interrogate millions of DNA
   sequences at a time. What's more, these measurements can be observed
   and recorded with a simple hand-held imaging device -- even a cell
   phone camera will do.
   "The assumption has been that no detection technique could be more
   sensitive than fluorescent labeling, but this is completely untrue, as
   our results have plainly demonstrated," said Groves. "We've shown that
   changes in surface charge density as a result of specific DNA
   hybridization can be detected and quantified with 50-picometer
   sensitivity, single base-pair mismatch selectivity, and in the
   presence of complex backgrounds. Furthermore, our electrostatic
   detection technique should render DNA and RNA microarrays sufficiently
   cost effective for broad world-health applications, as well as
   research."
   FURTHER READING
   [42]Nature biotechnology paper: Electrostatic readout of DNA
   microarrays with charged microspheres

     DNA microarrays are used for gene-expression profiling,
     single-nucleotide polymorphism detection and disease diagnosis1, 2,
     3. A persistent challenge in this area is the lack of microarray
     screening technology suitable for integration into routine clinical
     care4, 5. Here, we describe a method for sensitive and label-free
     electrostatic readout of DNA or RNA hybridization on microarrays.
     The electrostatic properties of the microarray are measured from
     the position and motion of charged microspheres randomly dispersed
     over the surface. We demonstrate nondestructive electrostatic
     imaging with 10-m lateral resolution over centimeter-length scales,
     which is four-orders of magnitude larger than that achievable with
     conventional scanning electrostatic force microscopy. Changes in
     surface charge density as a result of specific hybridization can be
     detected and quantified with 50-pM sensitivity, single base-pair
     mismatch selectivity and in the presence of complex background.
     Because the naked eye is sufficient to read out hybridization, this
     approach may facilitate broad application of multiplexed assays

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   Revolutionize Medical Diagnostics'

[60]LIFT cancer clinical trials

   [61]Human trials starting for Zheng Cui's LIFT 'cancer cure' H/T
   [62]to Alfin
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     For the upcoming study, the researchers are currently recruiting
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   [69]The LIFT method and signing up for the trials The procedure was
   previously called GIFT.
   LIFT is an investigational new cancer treatment that will transfer
   naturally-occurring cancer-killing activity (CKA) in the granulocytes
   of a selected donor into the body of a cancer patient.
   Here's how the LIFT method works:
   * Donor selection: Healthy young volunteers will be screened for the
   level of CKA, blood types, HLA types, infectious disease status, CMV
   status etc. by blood tests and physical examinations. The selected
   volunteers will become part of the Donor Registry. The test results of
   selected volunteers will be used to match with specific patients.
   * Granulocyte collection: When a qualified patient is identified for
   treatment, granulocytes from several matched donors in the donor
   registry will be mobilized by two medications and collected by a
   well-established medical procedure called "apheresis" or "pheresis." A
   pheresis machine separates donor granulocytes from other blood
   products that will be immediately returned to donors so that the
   health impact on granulocyte donation is much smaller than on whole
   blood donation. Granulocyte mobilization and collection by apheresis
   have been used in clinical practices for a long time with very good
   safety record.
   * Patient selection and granulocyte infusion: Qualified patients will
   be selected according to general health condition, disease status and
   match criteria. Freshly collected granulocytes from matched donors
   will be given to patients via IV infusion. Granulocytes cannot be
   stored or shipped for later uses.
   Granulocyte infusion therapy has been traditionally used for treating
   neutropenia-related infections for over 30 years with excellent safety
   records. Since a significantly higher dose of granulocytes for each
   patient is proposed in our new cancer treatment, the primary goal of
   this clinical trial is to test whether the recipients can tolerate the
   proposed dose of granulocytes.
   The main focus of the trial is the possibility of developing
   Transfusion-Associated Graft vs Host Diseases (TA-GVHD) and other
   potential side effects in the study subjects at higher doses of donor
   granulocyte.
   Donor granulocytes per se are not known to produce TA-GVHD. However,
   granulocytes collected via apheresis may contain with some donor
   T-lymphocytes that in some rare occasions can produce various degrees
   of TA-GVHD in some individuals, especially the recipients with immune
   suppression. If possible, we will also make observations on the
   efficacy of this treatment on the study subjects with measurable
   diseases of cancer. We will recruit 22 cancer patients as study
   subjects for this trial.
   FURTHER READING
   [70]More at redorbit

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----- End forwarded message -----
-- 
Eugen* Leitl <a href="http://leitl.org">leitl</a> http://leitl.org
______________________________________________________________
ICBM: 48.07100, 11.36820 http://www.ativel.com http://postbiota.org
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